CDS

Accession Number TCMCG006C24715
gbkey CDS
Protein Id XP_022551925.1
Location complement(join(28173063..28173276,28173356..28173469,28173544..28173647,28173727..28173840,28173946..28174026,28174120..28174188,28174289..28174378,28174724..28174813,28175080..28175169,28175268..28175285,28175287..28175334,28175470..28175709,28175854..28175970,28176516..28176575,28176662..28176736,28177099..28177230,28177386..28177466,28177551..28177607,28177793..28177880,28177954..28178139,28178628..28178751,28178847..28178943,28179014..28179109))
Gene LOC106412231
GeneID 106412231
Organism Brassica napus

Protein

Length 794aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA293435
db_source XM_022696204.1
Definition LOW QUALITY PROTEIN: vacuolar protein sorting-associated protein 35B [Brassica napus]

EGGNOG-MAPPER Annotation

COG_category U
Description Plays a role in vesicular protein sorting
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko00001        [VIEW IN KEGG]
ko04131        [VIEW IN KEGG]
KEGG_ko ko:K18468        [VIEW IN KEGG]
EC -
KEGG_Pathway ko04144        [VIEW IN KEGG]
map04144        [VIEW IN KEGG]
GOs GO:0003674        [VIEW IN EMBL-EBI]
GO:0005215        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005737        [VIEW IN EMBL-EBI]
GO:0005768        [VIEW IN EMBL-EBI]
GO:0005770        [VIEW IN EMBL-EBI]
GO:0006810        [VIEW IN EMBL-EBI]
GO:0006886        [VIEW IN EMBL-EBI]
GO:0008104        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008565        [VIEW IN EMBL-EBI]
GO:0012505        [VIEW IN EMBL-EBI]
GO:0015031        [VIEW IN EMBL-EBI]
GO:0015833        [VIEW IN EMBL-EBI]
GO:0016020        [VIEW IN EMBL-EBI]
GO:0016192        [VIEW IN EMBL-EBI]
GO:0016197        [VIEW IN EMBL-EBI]
GO:0016482        [VIEW IN EMBL-EBI]
GO:0030904        [VIEW IN EMBL-EBI]
GO:0031410        [VIEW IN EMBL-EBI]
GO:0031982        [VIEW IN EMBL-EBI]
GO:0032991        [VIEW IN EMBL-EBI]
GO:0033036        [VIEW IN EMBL-EBI]
GO:0034613        [VIEW IN EMBL-EBI]
GO:0042147        [VIEW IN EMBL-EBI]
GO:0042886        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044425        [VIEW IN EMBL-EBI]
GO:0044444        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0045184        [VIEW IN EMBL-EBI]
GO:0046907        [VIEW IN EMBL-EBI]
GO:0051179        [VIEW IN EMBL-EBI]
GO:0051234        [VIEW IN EMBL-EBI]
GO:0051641        [VIEW IN EMBL-EBI]
GO:0051649        [VIEW IN EMBL-EBI]
GO:0070727        [VIEW IN EMBL-EBI]
GO:0071702        [VIEW IN EMBL-EBI]
GO:0071705        [VIEW IN EMBL-EBI]
GO:0097708        [VIEW IN EMBL-EBI]
GO:0098796        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGAGGAGGCTGGGCGGAGTAGAAGACGAGGAGAAGTGGCTGGCGGAAGGAATCGCGGGAATCCAGCACAACGCTTTCTTCATGCATCGCGCCTTGGACGCGAACAATCTCAGAGAAGTCCTCAAGTACTCCGCTCTCATGCTATCTGAGCTCCGCACCTCCAAGCTCTCTCCTCAGAAATACTACGATCTCTATATGCGAGCTTTCGATCAGTTGAGGCAGTTGGAGATTTTCTTGAGGGATGAGAGCAGGCATGGCTTACCTGTGGTTGATTTGTATGAGCTTGTTCAACATGCCGGCAACATTTTGCCCCGGATGTATCTGCTATGTACGGTAGGGTCTGTTTATATCAAAAGCAAGCAGGCTCCTTCTAAGGATGTTCTTAAGGATCTCGTGGAGATGTGCCGAGGTGTTCAACATCCTATTCGTGGGCTCTTTCTGAGGAGTTATCTTACCCAAGTGAGCAGGGATAAGTTACCTGAGATTGGTTCAGACTACCAAGGAGATGCAAATACTGTGATGGATGCTGTCGAGTTTGTGCTACAAAATTTCACTGAGATTAATAAGCTCTGGGTTCGAATTCAGCATCAGGGACCTGGAACAGTTCGAGAGAAGCAGAAGAAAGAGAGGAACGAACTTCGTGATCTTGTTGGGAAAAATTTGCACGTTCTAGGACAAATAGAAGGTGTTCACCTTGAGATGTACAAAGAGACTGTTCTTCCAAGGATCCTTGAATAGGTCGTCAACTGTAAAGATGATTTTGCTCAGTACTATCTGATGGAGTGCATAATTCAAGTCTTTCCTGATGAGTATCACTTGCAGACTCTTGAGACACGTTTGGCTGCTTGTACTCAACTGATGCCAACAGTGGACACCAAGATAGTGTTAACTCAACTGATGGACCGGCTGTCAAACTATGCTGTCTCAAGTCCAGATGTTTTACACGAATTTTTGCAAGTGGAAGCTTTTGCTAAACTGAACAATGCAATTGGAAAGGTGATAGATACACAGATTGAGATGCCTATTGTTGGAGCTATGACGCTGTTTGTCTCTCTTCTGACTTTTGCACTCCGGGTTCATCCTGATCGACTCGACTATGTGGATCAAGTATTGGGCGCATGTGTAGTTAAACTTTCCAGTGGGCCCAAGCTGGAGGACGCCCGTGCAATGAAACAAGTTGTTGCACTTCTGAGTGCTCCTTTAGAAAAATACAATGACATAGTTACAGCTCTTACACTATCAAATTATCCACGAGTCATGGACCATCTTGATGATGGAACGAATAAACTAATGGCAATGCTTATAATTCAAAGTATAATGAAAAACAACTCGTGTATTTCAACTGCTGATAAGGTTGAGGTGTTGTTTGAATTGATAAAAGGACTTATAAAGGATTTGGATGAAACGCCTACAGAGGAGCTTGATGAAGAGGATTTCCAGGAGGAACAAAATTCAGTTGCCCGACTGATAAATATGCTTGATAATGAAGAACCAGAGGAGATGCTAAAGATTATTTGTGTTGTGAGAAAGCATCTTATGACAGGAGGAACTAGACGCCTGCCTTTTACCATTCCCCCGCTTATTTTTTCTGCTCTCAGGTTGGTCAGGCAGCTAGAATCCCAGGGTGGAGATATGACTGGAGAAGATCTCCCAGCAACCCCGAGGAAGATTTTTCAGATTCTCAACCAGACAATCGAGGTTCTTTCGTCAGTTCCATGTCCTGAACTCGCTTTAAGGCTCTACCTCCAGTGCGCTGAGGCCGCAAGTGATTGTGATCTTGAGCCTGCTGCTTATGAGTTTTTCACTCAAGCATTTATATTATACGAGGAAGAAATCGCGGACTCCAAGGCACAGGTCACTGCAATTCATCTGATTGCTGGAACCTTGCAAAGGATCAATGTCTTTGGTGTCGAAAACAGAGACACCTTGACACCTAAAGCAACCGGGGGCGGGTACTCAGCAAGGCTTTTAAAGAAGCCTGATCAGTGTCGAGCGGTTTATGCATGTTCTCACCTCTTCTGGGTCGATGATCTAGATGGCATCAAAGATGGAGAAAGAGCTCTTCTATGTTTAAGACGTGCACTGAGGATAGCAAACGCAGCTCAACAAATGGCTAATGCAACCCGAGGTAGCAGCGGATCAGTCACGCTGTTTGTCGAAATCTTGAACAAGTACATATATTTCTATGAGAAAGGGAGTCCACATATAACCCCATCTGATATACAGTCTCTGATAGAGTTGATTAACACGGAGATGCAAAGCGACAACAACGGTAACACAAGAACCCACTCAGACCCTTTCTTTACAAGCACATTGCGTTACATGAGGTTCCAAAAACAGAAAGGTGGCTTGATGGGTGACAAATATGAACTCATTAAGTTGTGA
Protein:  
MRRLGGVEDEEKWLAEGIAGIQHNAFFMHRALDANNLREVLKYSALMLSELRTSKLSPQKYYDLYMRAFDQLRQLEIFLRDESRHGLPVVDLYELVQHAGNILPRMYLLCTVGSVYIKSKQAPSKDVLKDLVEMCRGVQHPIRGLFLRSYLTQVSRDKLPEIGSDYQGDANTVMDAVEFVLQNFTEINKLWVRIQHQGPGTVREKQKKERNELRDLVGKNLHVLGQIEGVHLEMYKETVLPRILEXVVNCKDDFAQYYLMECIIQVFPDEYHLQTLETRLAACTQLMPTVDTKIVLTQLMDRLSNYAVSSPDVLHEFLQVEAFAKLNNAIGKVIDTQIEMPIVGAMTLFVSLLTFALRVHPDRLDYVDQVLGACVVKLSSGPKLEDARAMKQVVALLSAPLEKYNDIVTALTLSNYPRVMDHLDDGTNKLMAMLIIQSIMKNNSCISTADKVEVLFELIKGLIKDLDETPTEELDEEDFQEEQNSVARLINMLDNEEPEEMLKIICVVRKHLMTGGTRRLPFTIPPLIFSALRLVRQLESQGGDMTGEDLPATPRKIFQILNQTIEVLSSVPCPELALRLYLQCAEAASDCDLEPAAYEFFTQAFILYEEEIADSKAQVTAIHLIAGTLQRINVFGVENRDTLTPKATGGGYSARLLKKPDQCRAVYACSHLFWVDDLDGIKDGERALLCLRRALRIANAAQQMANATRGSSGSVTLFVEILNKYIYFYEKGSPHITPSDIQSLIELINTEMQSDNNGNTRTHSDPFFTSTLRYMRFQKQKGGLMGDKYELIKL